EnhancerDB
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  3. rs541669871[chr15:40165822]
Enhancers that have rs541669871[chr15:40165822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40165269 40184115 enh31319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Ovary Astrocyte Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs541669871[chr15:40165822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40165805 40165826 IRF1 JASPAR yes 22915386
chr15 40165806 40165827 IRF1 JASPAR yes 22915387
chr15 40165807 40165822 STAT2 JASPAR yes 22915388
chr15 40165811 40165832 IRF1 JASPAR yes 22915389
chr15 40165812 40165827 FOXP1 JASPAR yes 22915390
chr15 40165812 40165833 IRF1 JASPAR yes 22915391
chr15 40165816 40165837 IRF1 JASPAR yes 22915392
chr15 40165817 40165832 FOXP1 JASPAR yes 22915393
chr15 40165819 40165834 FOXP1 JASPAR yes 22915394
chr15 40165821 40165836 FOXP1 JASPAR yes 22915395
chr15 40165822 40165837 FOXP1 JASPAR yes 22915396
Genes associated with rs541669871[chr15:40165822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More