EnhancerDB
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  3. rs541744466[chr1:39551343]
Enhancers that have rs541744466[chr1:39551343]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39550145 39560259 enh11757
Brain (SK-N-MC) Esophagus Astrocyte Placenta Uterus Heart
Transcript factors that have rs541744466[chr1:39551343]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39551327 39551343 POU4F2 JASPAR yes 28249222
chr1 39551327 39551343 POU4F3 JASPAR yes 28249223
chr1 39551328 39551343 MEF2C JASPAR yes 28249224
chr1 39551329 39551343 POU4F1 JASPAR yes 28249226
chr1 39551337 39551348 CDX2 JASPAR yes 28249228
chr1 39551338 39551349 HOXA10 JASPAR yes 28249229
chr1 39551339 39551348 CDX1 JASPAR yes 28249230
chr1 39551339 39551349 HOXA13 JASPAR yes 28249231
chr1 39551339 39551349 HOXB13 JASPAR yes 28249232
chr1 39551339 39551349 HOXD13 JASPAR yes 28249233
chr1 39551340 39551361 IRF1 JASPAR yes 28249234
chr1 39551343 39551349 TBP TRANSFAC yes 28249235
Genes associated with rs541744466[chr1:39551343], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More