EnhancerDB
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  3. rs541802152[chr1:199661619]
Enhancers that have rs541802152[chr1:199661619]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 199645985 199663121 enh27409
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Astrocyte Muscle (A673) Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9)
Transcript factors that have rs541802152[chr1:199661619]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 199661607 199661622 IRF9 JASPAR yes 34392019
chr1 199661618 199661630 FOXC2 JASPAR yes 34392020
chr1 199661619 199661631 FOXI1 JASPAR yes 34392021
Genes associated with rs541802152[chr1:199661619], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More