EnhancerDB
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  3. rs541823868[chr2:28025234]
Enhancers that have rs541823868[chr2:28025234]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28016012 28029300 enh18378
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-MC) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Breast Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs541823868[chr2:28025234]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28025226 28025236 MNX1 JASPAR yes 72592077
chr2 28025226 28025236 POU6F1 JASPAR yes 72592078
chr2 28025227 28025235 LMX1A JASPAR yes 72592079
chr2 28025227 28025235 LMX1B JASPAR yes 72592080
chr2 28025227 28025235 NKX6-1 JASPAR yes 72592081
chr2 28025227 28025235 NKX6-2 JASPAR yes 72592082
chr2 28025227 28025235 VAX1 JASPAR yes 72592083
chr2 28025227 28025235 VAX2 JASPAR yes 72592084
chr2 28025227 28025235 VSX1 JASPAR yes 72592085
chr2 28025227 28025235 VSX2 JASPAR yes 72592086
chr2 28025228 28025239 PHOX2A JASPAR yes 72592087
chr2 28025228 28025239 PROP1 JASPAR yes 72592088
chr2 28025231 28025252 IRF1 JASPAR yes 72592089
chr2 28025234 28025238 YY1 TRANSFAC yes 72592090
Genes associated with rs541823868[chr2:28025234], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More