EnhancerDB
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  3. rs541825489[chr1:98403605]
Enhancers that have rs541825489[chr1:98403605]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 98400585 98406038 enh518
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
chr1 98403373 98403764 vista2644
VISTA
Transcript factors that have rs541825489[chr1:98403605]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 98403442 98403918 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21325538
chr1 98403442 98403918 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816335
chr1 98403512 98403968 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816336
chr1 98403532 98403862 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816337
chr1 98403535 98403805 STAT3 UCSC Txn Factor no Conserved 107816338
chr1 98403539 98403798 FOS UCSC Txn Factor no Conserved 107816339
chr1 98403540 98403800 JUND UCSC Txn Factor no Conserved 107816340
chr1 98403540 98403800 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816341
chr1 98403542 98403798 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816342
chr1 98403543 98403770 JUN UCSC Txn Factor no Conserved 107816343
chr1 98403543 98404166 GATA2 UCSC Txn Factor no Conserved 107816344
chr1 98403548 98403878 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816345
chr1 98403554 98403776 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107816346
Genes associated with rs541825489[chr1:98403605], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More