EnhancerDB
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  3. rs541927459[chr1:178379518]
Enhancers that have rs541927459[chr1:178379518]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178379281 178379736 vista4035
VISTA
chr1 178379285 178389386 enh58182
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Peripheral Blood (MM.1S) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs541927459[chr1:178379518]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178379140 178379520 ZNF274 GTRD no Bone Marrow (K562) 107847381
chr1 178379293 178380540 ZBTB33 GTRD no Lung (A549) 107847382
chr1 178379401 178380380 ZNF274 GTRD no Bone Marrow (K562) 107847383
chr1 178379483 178380133 ZNF274 GTRD no Bone Marrow (K562) 107847384
chr1 178379491 178380215 ZNF274 GTRD no Bone Marrow (K562) 107847385
chr1 178379507 178379519 YY1 JASPAR yes 33418732
chr1 178379507 178379519 YY1 JASPAR yes 118405384
chr1 178379511 178379525 TCF7L2 JASPAR yes 33418733
chr1 178379511 178379525 TCF7L2 JASPAR yes 118405385
chr1 178379511 178379526 LEF1 JASPAR yes 33418734
chr1 178379511 178379526 LEF1 JASPAR yes 118405386
Genes associated with rs541927459[chr1:178379518], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More