EnhancerDB
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  3. rs541948187[chr5:172693979]
Enhancers that have rs541948187[chr5:172693979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172691485 172700950 enh8882
Spleen Muscle (Myotube) Blood (Karpas-422) Heart
chr5 172692201 172696969 vista1402
VISTA
Transcript factors that have rs541948187[chr5:172693979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172693970 172693980 HOXA13 JASPAR yes 67861238
chr5 172693970 172693980 HOXB13 JASPAR yes 67861239
chr5 172693970 172693980 HOXD13 JASPAR yes 67861240
chr5 172693970 172693980 HOXA13 JASPAR yes 111956588
chr5 172693970 172693980 HOXB13 JASPAR yes 111956589
chr5 172693970 172693980 HOXD13 JASPAR yes 111956590
chr5 172693970 172693981 HOXA10 JASPAR yes 67861241
chr5 172693970 172693981 HOXA10 JASPAR yes 111956591
chr5 172693971 172693980 CDX1 JASPAR yes 67861242
chr5 172693971 172693980 CDX1 JASPAR yes 111956592
chr5 172693971 172693982 CDX2 JASPAR yes 67861243
chr5 172693971 172693982 CDX2 JASPAR yes 111956593
chr5 172693972 172693986 ONECUT2 JASPAR yes 67861244
chr5 172693972 172693986 ONECUT3 JASPAR yes 67861245
chr5 172693972 172693986 ONECUT2 JASPAR yes 111956594
chr5 172693972 172693986 ONECUT3 JASPAR yes 111956595
chr5 172693974 172693989 FOXP1 JASPAR yes 67861246
chr5 172693974 172693989 FOXP1 JASPAR yes 111956596
chr5 172693975 172693984 SRY JASPAR yes 67861247
chr5 172693975 172693984 SRY JASPAR yes 111956597
Genes associated with rs541948187[chr5:172693979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More