EnhancerDB
  1. Home
  2. SNP
  3. rs541980[chr3:189956400]
Enhancers that have rs541980[chr3:189956400]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 189945598 189959315 enh21217
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Peripheral Blood (MM.1S) Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs541980[chr3:189956400]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 189956394 189956400 HiNF-A TRANSFAC yes 8636169
Genes associated with rs541980[chr3:189956400], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More