EnhancerDB
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  3. rs541988594[chr17:37366339]
Enhancers that have rs541988594[chr17:37366339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 37361244 37366755 enh4391
Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs541988594[chr17:37366339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 37365775 37366435 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108253186
chr17 37365932 37366602 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108253188
chr17 37365951 37366387 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108253189
chr17 37365966 37366342 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108253190
chr17 37366029 37366549 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108253194
chr17 37366061 37366465 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108253199
chr17 37366331 37366343 TFAP2A JASPAR yes 54152263
Genes associated with rs541988594[chr17:37366339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More