EnhancerDB
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  3. rs542044342[chr1:200150733]
Enhancers that have rs542044342[chr1:200150733]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200146725 200155834 enh27413
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Pancreas Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs542044342[chr1:200150733]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200149128 200152220 ZNF143 GTRD no Epithelial (MCF-7) 21362567
chr1 200149202 200152250 ZNF143 GTRD no Epithelial (MCF-7) 21362568
chr1 200149518 200153004 ZNF143 GTRD no Epithelial (MCF-7) 21362569
chr1 200150022 200151577 ZNF143 GTRD no Epithelial (MCF-7) 21362570
chr1 200150141 200151561 ZNF143 GTRD no Epithelial (MCF-7) 21362572
chr1 200150197 200151549 ZNF143 GTRD no Epithelial (MCF-7) 21362573
chr1 200150223 200151234 ZNF143 GTRD no Epithelial (MCF-7) 21362574
chr1 200150273 200151464 ZNF143 GTRD no Epithelial (MCF-7) 21362575
chr1 200150274 200151382 ZNF143 GTRD no Epithelial (MCF-7) 21362576
chr1 200150336 200151549 ZNF143 GTRD no Epithelial (MCF-7) 21362577
chr1 200150339 200151113 ZNF143 GTRD no Epithelial (MCF-7) 21362578
chr1 200150363 200151519 ZNF143 GTRD no Epithelial (MCF-7) 21362579
chr1 200150368 200151347 ZNF143 GTRD no Epithelial (MCF-7) 21362580
chr1 200150372 200151625 ZNF143 GTRD no Epithelial (MCF-7) 21362581
chr1 200150395 200151332 ZNF143 GTRD no Epithelial (MCF-7) 21362582
chr1 200150395 200151338 ZNF143 GTRD no Epithelial (MCF-7) 21362583
chr1 200150395 200151408 ZNF143 GTRD no Epithelial (MCF-7) 21362584
chr1 200150408 200151120 ZNF143 GTRD no Epithelial (MCF-7) 21362585
chr1 200150411 200151239 ZNF143 GTRD no Epithelial (MCF-7) 21362586
chr1 200150414 200151378 ZNF143 GTRD no Epithelial (MCF-7) 21362587
chr1 200150420 200151565 ZNF143 GTRD no Epithelial (MCF-7) 21362588
chr1 200150425 200151121 ZNF143 GTRD no Epithelial (MCF-7) 21362589
chr1 200150449 200151274 ZNF143 GTRD no Epithelial (MCF-7) 21362590
chr1 200150450 200151277 ZNF143 GTRD no Epithelial (MCF-7) 21362591
chr1 200150451 200151396 ZNF143 GTRD no Epithelial (MCF-7) 21362592
chr1 200150462 200151332 ZNF143 GTRD no Epithelial (MCF-7) 21362593
chr1 200150464 200151180 ZNF143 GTRD no Epithelial (MCF-7) 21362594
chr1 200150481 200151346 ZNF143 GTRD no Epithelial (MCF-7) 21362595
chr1 200150489 200151428 ZNF143 GTRD no Epithelial (MCF-7) 21362596
chr1 200150505 200151180 ZNF143 GTRD no Epithelial (MCF-7) 21362597
chr1 200150507 200151373 ZNF143 GTRD no Epithelial (MCF-7) 21362598
chr1 200150514 200151256 ZNF143 GTRD no Epithelial (MCF-7) 21362599
chr1 200150528 200151155 ZNF143 GTRD no Epithelial (MCF-7) 21362600
chr1 200150530 200151237 ZNF143 GTRD no Epithelial (MCF-7) 21362601
chr1 200150535 200151149 ZNF143 GTRD no Epithelial (MCF-7) 21362602
chr1 200150543 200151269 ZNF143 GTRD no Epithelial (MCF-7) 21362603
chr1 200150554 200151104 ZNF143 GTRD no Epithelial (MCF-7) 21362604
chr1 200150569 200151215 ZNF143 GTRD no Epithelial (MCF-7) 21362605
chr1 200150571 200151195 ZNF143 GTRD no Epithelial (MCF-7) 21362606
chr1 200150617 200151340 ZNF143 GTRD no Epithelial (MCF-7) 21362607
chr1 200150625 200151234 ZNF143 GTRD no Epithelial (MCF-7) 21362608
chr1 200150626 200151155 ZNF143 GTRD no Epithelial (MCF-7) 21362609
chr1 200150633 200151162 ZNF143 GTRD no Epithelial (MCF-7) 21362610
chr1 200150645 200151262 ZNF143 GTRD no Epithelial (MCF-7) 21362611
chr1 200150706 200151303 ZNF143 GTRD no Epithelial (MCF-7) 21362612
chr1 200150733 200150744 FOXA1 JASPAR yes 34420368
Genes associated with rs542044342[chr1:200150733], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More