EnhancerDB
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  3. rs542049[chr1:109696333]
Enhancers that have rs542049[chr1:109696333]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 109689565 109697095 enh27058
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Stomach Muscle (A673) Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs542049[chr1:109696333]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 109696324 109696341 PAX9 JASPAR yes 31412287
chr1 109696325 109696344 PAX5 JASPAR yes 31412288
Genes associated with rs542049[chr1:109696333], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More