EnhancerDB
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  3. rs542098356[chr19:2889225]
Enhancers that have rs542098356[chr19:2889225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2885265 2891215 enh17853
Liver (HepG2) Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Placenta Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs542098356[chr19:2889225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2888354 2889468 ZNF274 GTRD no Blood (GM12878) 108364299
chr19 2888383 2889365 TCF7L2 GTRD no Colon (HCT116) 108364300
chr19 2888438 2889406 ZNF274 GTRD no Blood (GM12878) 108364301
chr19 2888499 2889343 MYOD GTRD no Muscle (Myoblast) 108364302
chr19 2888520 2889362 ZNF143 GTRD no Epithelial (MCF-7) 108364303
chr19 2888527 2889230 ZNF274 GTRD no Blood (GM12878) 108364305
chr19 2888547 2889348 ZNF143 GTRD no Epithelial (MCF-7) 108364307
chr19 2888565 2889380 ZNF274 GTRD no Blood (GM12878) 108364308
chr19 2888569 2889432 ZNF274 GTRD no Blood (GM12878) 108364309
chr19 2888577 2889418 ZNF274 GTRD no Blood (GM12878) 108364310
chr19 2888587 2889387 ZNF274 GTRD no Blood (GM12878) 108364311
chr19 2888589 2889292 ZNF274 GTRD no Blood (GM12878) 108364312
chr19 2888591 2889340 ZNF274 GTRD no Blood (GM12878) 108364313
chr19 2888594 2889416 ZNF274 GTRD no Blood (GM12878) 108364314
chr19 2888599 2889357 ZNF274 GTRD no Blood (GM12878) 108364316
chr19 2888600 2889392 ZNF274 GTRD no Blood (GM12878) 108364317
chr19 2888602 2889332 ZNF143 GTRD no Epithelial (MCF-7) 108364318
chr19 2888621 2889346 ZNF274 GTRD no Blood (GM12878) 108364324
chr19 2888624 2889381 ZNF274 GTRD no Blood (GM12878) 108364325
chr19 2888628 2889349 ZNF143 GTRD no Epithelial (MCF-7) 108364327
chr19 2888630 2889353 ZNF274 GTRD no Blood (GM12878) 108364328
chr19 2888634 2889377 ZNF274 GTRD no Blood (GM12878) 108364330
chr19 2888635 2889314 ZNF143 GTRD no Epithelial (MCF-7) 108364331
chr19 2888637 2889264 ZNF274 GTRD no Blood (GM12878) 108364332
chr19 2888639 2889415 ZNF274 GTRD no Blood (GM12878) 108364333
chr19 2888640 2889293 ZNF143 GTRD no Epithelial (MCF-7) 108364334
chr19 2888645 2889329 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108364335
chr19 2888652 2889339 ZNF274 GTRD no Bone Marrow (K562) 108364336
chr19 2888653 2889348 TCF7L2 GTRD no Colon (HCT116) 108364337
chr19 2888664 2889352 ZNF274 GTRD no Blood (GM12878) 108364339
chr19 2888665 2889346 ZNF274 GTRD no Blood (GM12878) 108364341
chr19 2888673 2889422 ZNF274 GTRD no Blood (GM12878) 108364343
chr19 2888692 2889393 ZNF274 GTRD no Blood (GM12878) 108364344
chr19 2888706 2889396 ZNF274 GTRD no Blood (GM12878) 108364346
chr19 2888707 2889252 ZNF274 GTRD no Bone Marrow (K562) 108364347
chr19 2888712 2889353 ZNF143 GTRD no Epithelial (MCF-7) 108364348
chr19 2888722 2889382 TCF7L2 GTRD no Colon (HCT116) 108364349
chr19 2888724 2889392 TCF7L2 GTRD no Colon (HCT116) 108364350
chr19 2888735 2889339 ZNF274 GTRD no Blood (GM12878) 108364351
chr19 2888782 2889326 ZNF274 GTRD no Blood (GM12878) 108364352
chr19 2888890 2889326 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108364353
chr19 2888955 2889378 TCF7L2 GTRD no Colon (HCT116) 108364354
chr19 2888963 2889270 ZNF274 GTRD no Blood (GM12878) 108364355
chr19 2889005 2889265 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108364356
chr19 2889061 2889273 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108364357
chr19 2889225 2889240 NR2C2 JASPAR yes 112100026
Genes associated with rs542098356[chr19:2889225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More