EnhancerDB
  1. Home
  2. SNP
  3. rs542098691[chr1:204442065]
Enhancers that have rs542098691[chr1:204442065]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204440545 204458655 enh12585
Cervix (HeLa-S3) Epithelial (MCF-7) Esophagus Liver Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs542098691[chr1:204442065]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204442046 204442066 RREB1 JASPAR yes 34704459
chr1 204442050 204442070 RREB1 JASPAR yes 34704460
chr1 204442055 204442068 DUXA JASPAR yes 34704461
chr1 204442056 204442067 DUX4 JASPAR yes 34704462
Genes associated with rs542098691[chr1:204442065], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More