EnhancerDB
  1. Home
  2. SNP
  3. rs542100914[chr1:40482954]
Enhancers that have rs542100914[chr1:40482954]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40476445 40483374 enh11772
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Blood (T-cell)
Transcript factors that have rs542100914[chr1:40482954]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40482941 40482956 FOXP1 JASPAR yes 28309580
chr1 40482942 40482957 FOXP1 JASPAR yes 28309581
chr1 40482942 40482963 IRF1 JASPAR yes 28309582
chr1 40482943 40482958 FOXP1 JASPAR yes 28309583
chr1 40482945 40482960 FOXP1 JASPAR yes 28309584
chr1 40482946 40482961 STAT2 JASPAR yes 28309585
chr1 40482947 40482962 FOXP1 JASPAR yes 28309586
chr1 40482947 40482968 IRF1 JASPAR yes 28309587
chr1 40482948 40482969 IRF1 JASPAR yes 28309588
chr1 40482949 40482961 FOXC2 JASPAR yes 28309589
chr1 40482950 40482961 FOXP2 JASPAR yes 28309590
chr1 40482952 40482973 IRF1 JASPAR yes 28309591
chr1 40482953 40482974 IRF1 JASPAR yes 28309592
Genes associated with rs542100914[chr1:40482954], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More