EnhancerDB
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  3. rs542133166[chr5:90591183]
Enhancers that have rs542133166[chr5:90591183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90560003 90595415 enh22426
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs542133166[chr5:90591183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90591175 90591190 HNF1A JASPAR yes 64188760
chr5 90591176 90591188 HNF1B JASPAR yes 64188761
chr5 90591179 90591194 FOXP1 JASPAR yes 64188763
chr5 90591182 90591193 FOXP2 JASPAR yes 64188764
Genes associated with rs542133166[chr5:90591183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More