EnhancerDB
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  3. rs542173259[chr1:17225087]
Enhancers that have rs542173259[chr1:17225087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs542173259[chr1:17225087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17225076 17225090 FOXF2 JASPAR yes 27063027
chr1 17225081 17225089 FOXG1 JASPAR yes 27063028
chr1 17225087 17225096 SRY JASPAR yes 27063029
Genes associated with rs542173259[chr1:17225087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More