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- rs542235974[chr17:78238851]
Enhancers that have rs542235974[chr17:78238851]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
78238527 |
78238862 |
vista26320 |
|
|
Transcript factors that have rs542235974[chr17:78238851]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
78236295
|
78240927
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306538
|
|
|
chr17
|
78237854
|
78240750
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108306540
|
|
|
chr17
|
78237904
|
78240649
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306542
|
|
|
chr17
|
78238106
|
78238871
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108306544
|
|
|
chr17
|
78238130
|
78239740
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306545
|
|
|
chr17
|
78238207
|
78240840
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306546
|
|
|
chr17
|
78238336
|
78239453
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108306548
|
|
|
chr17
|
78238672
|
78240331
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306552
|
|
|
chr17
|
78238739
|
78239350
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108306553
|
|
|
chr17
|
78238754
|
78239034
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108306554
|
|
|
chr17
|
78238771
|
78240811
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306555
|
|
|
chr17
|
78238818
|
78240479
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108306556
|
|
|
chr17
|
78238837
|
78238858
|
IRF1
|
JASPAR
|
yes
|
|
21314338
|
|
|
chr17
|
78238838
|
78238853
|
FOXP1
|
JASPAR
|
yes
|
|
21314339
|
|
|
chr17
|
78238838
|
78238859
|
IRF1
|
JASPAR
|
yes
|
|
21314340
|
|
|
chr17
|
78238839
|
78238851
|
FOXC2
|
JASPAR
|
yes
|
|
21314342
|
|
|
chr17
|
78238839
|
78238854
|
STAT2
|
JASPAR
|
yes
|
|
21314343
|
|
|
chr17
|
78238839
|
78238860
|
IRF1
|
JASPAR
|
yes
|
|
21314344
|
|
|
chr17
|
78238840
|
78238855
|
FOXP1
|
JASPAR
|
yes
|
|
21314345
|
|
|
chr17
|
78238840
|
78238861
|
IRF1
|
JASPAR
|
yes
|
|
21314346
|
|
|
chr17
|
78238842
|
78238857
|
FOXP1
|
JASPAR
|
yes
|
|
21314347
|
|
|
chr17
|
78238843
|
78238858
|
FOXP1
|
JASPAR
|
yes
|
|
21314348
|
|
|
chr17
|
78238844
|
78238859
|
FOXP1
|
JASPAR
|
yes
|
|
21314349
|
|
|
chr17
|
78238845
|
78238860
|
FOXP1
|
JASPAR
|
yes
|
|
21314350
|
|
|
chr17
|
78238846
|
78238861
|
FOXP1
|
JASPAR
|
yes
|
|
21314351
|
|
|
chr17
|
78238847
|
78238862
|
FOXP1
|
JASPAR
|
yes
|
|
21314352
|
|
Genes associated with rs542235974[chr17:78238851], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |