EnhancerDB
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  3. rs542243644[chr1:228274171]
Enhancers that have rs542243644[chr1:228274171]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228267485 228277903 enh89543
Muscle (Myoblast) Uterus Bone (Osteoblast) Prostate (RWPE1)
Transcript factors that have rs542243644[chr1:228274171]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228272466 228275153 TCF7L2 GTRD no Colon (HCT116) 107876859
chr1 228272466 228275153 TCF7L2 GTRD no Colon (HCT116) 107876860
chr1 228272646 228276693 TCF7L2 GTRD no Colon (HCT116) 107876861
chr1 228272646 228276693 TCF7L2 GTRD no Colon (HCT116) 107876862
chr1 228272880 228274199 ZNF143 GTRD no Epithelial (MCF-7) 107876863
chr1 228272946 228277339 TCF7L2 GTRD no Colon (HCT116) 107876864
chr1 228272946 228277339 TCF7L2 GTRD no Colon (HCT116) 107876865
chr1 228272967 228277706 ZNF274 GTRD no Bone Marrow (K562) 107876866
chr1 228272967 228277706 ZNF274 GTRD no Bone Marrow (K562) 107876867
chr1 228273075 228275052 ZNF143 GTRD no Epithelial (MCF-7) 107876868
chr1 228273075 228275052 ZNF143 GTRD no Epithelial (MCF-7) 107876869
chr1 228273140 228277516 ZNF274 GTRD no Bone Marrow (K562) 107876871
chr1 228273140 228277516 ZNF274 GTRD no Bone Marrow (K562) 107876872
chr1 228273329 228275262 ZNF143 GTRD no Epithelial (MCF-7) 107876874
chr1 228273329 228275262 ZNF143 GTRD no Epithelial (MCF-7) 107876875
chr1 228273379 228275872 ZNF274 GTRD no Bone Marrow (K562) 107876876
chr1 228273379 228275872 ZNF274 GTRD no Bone Marrow (K562) 107876877
chr1 228273459 228275872 ZNF274 GTRD no Bone Marrow (K562) 107876880
chr1 228273459 228275872 ZNF274 GTRD no Bone Marrow (K562) 107876881
chr1 228273473 228274216 ZBTB33 GTRD no Lung (A549) 107876882
chr1 228273479 228274469 ZBTB33 GTRD no Lung (A549) 107876883
chr1 228273479 228274469 ZBTB33 GTRD no Lung (A549) 107876884
chr1 228273542 228274246 ZNF274 GTRD no Bone Marrow (K562) 107876885
chr1 228273595 228274193 ZNF274 GTRD no Cervix (HeLa-S3) 107876888
chr1 228273606 228277082 TCF7L2 GTRD no Colon (HCT116) 107876889
chr1 228273606 228277082 TCF7L2 GTRD no Colon (HCT116) 107876890
chr1 228273627 228274191 ZNF274 GTRD no Bone Marrow (K562) 107876892
chr1 228273639 228274923 ZNF274 GTRD no Bone Marrow (K562) 107876894
chr1 228273639 228274923 ZNF274 GTRD no Bone Marrow (K562) 107876895
chr1 228273645 228274835 ZBTB33 GTRD no Lung (A549) 107876896
chr1 228273645 228274835 ZBTB33 GTRD no Lung (A549) 107876897
chr1 228273645 228274876 ZNF143 GTRD no Epithelial (MCF-7) 107876898
chr1 228273645 228274876 ZNF143 GTRD no Epithelial (MCF-7) 107876899
chr1 228273651 228274253 ZNF274 GTRD no Bone Marrow (K562) 107876900
chr1 228273663 228274270 ZNF274 GTRD no Bone Marrow (K562) 107876901
chr1 228273672 228274224 ZNF274 GTRD no Bone Marrow (K562) 107876902
chr1 228273687 228274748 ZNF274 GTRD no Bone Marrow (K562) 107876903
chr1 228273687 228274748 ZNF274 GTRD no Bone Marrow (K562) 107876904
chr1 228273723 228274191 ZNF274 GTRD no Bone Marrow (K562) 107876905
chr1 228273900 228275002 TCF7L2 GTRD no Colon (HCT116) 107876906
chr1 228274085 228274671 TCF7L2 GTRD no Colon (HCT116) 107876907
chr1 228274157 228274172 NR2C2 JASPAR yes 35900296
Genes associated with rs542243644[chr1:228274171], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More