EnhancerDB
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  3. rs542256061[chr17:62779359]
Enhancers that have rs542256061[chr17:62779359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62766945 62786397 enh4528
Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus
Transcript factors that have rs542256061[chr17:62779359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62778328 62779815 TCF7L2 GTRD no Colon (HCT116) 21779791
chr17 62778417 62779506 TCF7L2 GTRD no Colon (HCT116) 21779792
chr17 62778516 62779956 ZBTB33 GTRD no Brain (SK-N-SH) 21779793
chr17 62778577 62779457 ZBTB33 GTRD no Brain (SK-N-SH) 21779794
chr17 62778599 62779685 ZBTB33 GTRD no Brain (SK-N-SH) 21779795
chr17 62778695 62779751 ZBTB33 GTRD no Brain (SK-N-SH) 21779796
chr17 62778713 62779887 ZBTB33 GTRD no Brain (SK-N-SH) 21779797
chr17 62778742 62779799 ZBTB33 GTRD no Brain (SK-N-SH) 21779798
chr17 62778752 62779845 ZBTB33 GTRD no Brain (SK-N-SH) 21779799
chr17 62778763 62779875 ZBTB33 GTRD no Brain (SK-N-SH) 21779800
chr17 62778771 62779629 TCF7L2 GTRD no Colon (HCT116) 21779801
chr17 62778775 62779889 TCF7L2 GTRD no Colon (HCT116) 21779802
chr17 62778813 62779379 ZNF274 GTRD no Liver (HepG2) 21779803
chr17 62778826 62779983 TCF7L2 GTRD no Colon (HCT116) 21779804
chr17 62778862 62779615 ZBTB33 GTRD no Brain (SK-N-SH) 21779805
chr17 62778868 62779445 TCF7L2 GTRD no Colon (HCT116) 21779806
chr17 62778871 62779821 ZBTB33 GTRD no Brain (SK-N-SH) 21779807
chr17 62778873 62779480 TCF7L2 GTRD no Colon (HCT116) 21779808
chr17 62778911 62779544 MYOD GTRD no Muscle (Myoblast) 21779809
chr17 62778943 62779407 ZNF274 GTRD no Liver (HepG2) 21779811
chr17 62778962 62779554 TCF7L2 GTRD no Colon (HCT116) 21779812
chr17 62778964 62779865 ZNF274 GTRD no Liver (HepG2) 21779813
chr17 62778979 62779458 TCF7L2 GTRD no Colon (HCT116) 21779814
chr17 62779010 62779868 ZNF274 GTRD no Liver (HepG2) 21779815
chr17 62779172 62779848 ZNF274 GTRD no Liver (HepG2) 21779817
chr17 62779283 62779860 ZNF274 GTRD no Liver (HepG2) 21779818
Genes associated with rs542256061[chr17:62779359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More