EnhancerDB
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  3. rs542308253[chr10:21567778]
Enhancers that have rs542308253[chr10:21567778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 21565745 21577125 enh13036
Ovary Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs542308253[chr10:21567778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 21567669 21568045 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21420719
chr10 21567678 21568008 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21420720
chr10 21567678 21568054 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21420721
chr10 21567693 21567983 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21420722
chr10 21567703 21568039 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21420723
chr10 21567724 21567910 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21420724
chr10 21567727 21567920 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21420725
chr10 21567727 21567997 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21420726
chr10 21567735 21567953 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21420727
chr10 21567775 21567788 TFAP2A JASPAR yes 125889959
chr10 21567775 21567788 TFAP2B JASPAR yes 125889960
chr10 21567775 21567788 TFAP2C JASPAR yes 125889961
Genes associated with rs542308253[chr10:21567778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More