EnhancerDB
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  3. rs542328480[chr1:223328901]
Enhancers that have rs542328480[chr1:223328901]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223323845 223330755 enh12702
Astrocyte Placenta Brain (SK-N-MC) Stomach
Transcript factors that have rs542328480[chr1:223328901]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223328895 223328910 HNF1A JASPAR yes 35642940
chr1 223328896 223328909 HNF1B JASPAR yes 35642941
chr1 223328896 223328910 POU4F1 JASPAR yes 35642942
chr1 223328896 223328912 POU4F2 JASPAR yes 35642943
chr1 223328896 223328912 POU4F3 JASPAR yes 35642944
chr1 223328899 223328909 ESX1 JASPAR yes 35642945
chr1 223328899 223328909 GSX2 JASPAR yes 35642946
chr1 223328899 223328909 HOXB2 JASPAR yes 35642947
chr1 223328899 223328909 HOXB3 JASPAR yes 35642948
chr1 223328899 223328909 LHX6 JASPAR yes 35642949
chr1 223328899 223328909 MEOX2 JASPAR yes 35642950
chr1 223328899 223328909 MNX1 JASPAR yes 35642951
chr1 223328899 223328909 POU6F1 JASPAR yes 35642952
chr1 223328899 223328909 RAX JASPAR yes 35642953
chr1 223328900 223328908 LMX1A JASPAR yes 35642954
chr1 223328900 223328908 LMX1B JASPAR yes 35642955
chr1 223328900 223328908 NKX6-1 JASPAR yes 35642956
chr1 223328900 223328908 NKX6-2 JASPAR yes 35642957
chr1 223328900 223328908 VAX1 JASPAR yes 35642958
chr1 223328900 223328908 VAX2 JASPAR yes 35642959
chr1 223328900 223328908 VSX1 JASPAR yes 35642960
chr1 223328900 223328908 VSX2 JASPAR yes 35642961
Genes associated with rs542328480[chr1:223328901], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More