-
Home
- SNP
- rs542340684[chr1:217544091]
Enhancers that have rs542340684[chr1:217544091]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
217534560 |
217549895 |
enh925 |
|
|
Transcript factors that have rs542340684[chr1:217544091]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
217544075
|
217544428
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21380660
|
|
|
chr1
|
217544088
|
217544103
|
FOXP1
|
JASPAR
|
yes
|
|
35332675
|
|
|
chr1
|
217544089
|
217544104
|
FOXP1
|
JASPAR
|
yes
|
|
35332676
|
|
|
chr1
|
217544089
|
217544388
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21380661
|
|
|
chr1
|
217544090
|
217544105
|
FOXP1
|
JASPAR
|
yes
|
|
35332677
|
|
|
chr1
|
217544091
|
217544106
|
FOXP1
|
JASPAR
|
yes
|
|
35332678
|
|
|
chr1
|
217544091
|
217544112
|
IRF1
|
JASPAR
|
yes
|
|
35332679
|
|
Genes associated with rs542340684[chr1:217544091], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |