EnhancerDB
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  3. rs542352268[chr1:8096160]
Enhancers that have rs542352268[chr1:8096160]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8089365 8111955 enh11459
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542352268[chr1:8096160]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8088588 8098693 TCF7L2 GTRD no Colon (HCT116) 21325212
chr1 8096149 8096160 FOXB1 JASPAR yes 26502693
chr1 8096150 8096161 FOXB1 JASPAR yes 26502695
chr1 8096152 8096160 FOXL1 JASPAR yes 26502696
chr1 8096156 8096169 POU3F3 JASPAR yes 26502697
chr1 8096157 8096169 POU3F1 JASPAR yes 26502698
chr1 8096157 8096170 POU2F2 JASPAR yes 26502699
chr1 8096158 8096166 FOXL1 JASPAR yes 26502700
chr1 8096158 8096167 POU3F4 JASPAR yes 26502701
chr1 8096158 8096169 FOXB1 JASPAR yes 26502702
Genes associated with rs542352268[chr1:8096160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More