EnhancerDB
  1. Home
  2. SNP
  3. rs542373636[chr1:218569883]
Enhancers that have rs542373636[chr1:218569883]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218562007 218578395 enh12671
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Epithelial (MCF-7)
Transcript factors that have rs542373636[chr1:218569883]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218569866 218569886 RREB1 JASPAR yes 35376035
chr1 218569873 218569894 IRF1 JASPAR yes 35376037
chr1 218569875 218569890 STAT2 JASPAR yes 35376038
chr1 218569876 218569890 STAT1 JASPAR yes 35376039
chr1 218569877 218569892 IRF9 JASPAR yes 35376040
chr1 218569877 218569898 IRF1 JASPAR yes 35376041
chr1 218569878 218569893 FOXP1 JASPAR yes 35376042
chr1 218569879 218569900 IRF1 JASPAR yes 35376043
chr1 218569880 218569895 FOXP1 JASPAR yes 35376044
chr1 218569882 218569897 FOXP1 JASPAR yes 35376045
chr1 218569883 218569898 FOXP1 JASPAR yes 35376046
Genes associated with rs542373636[chr1:218569883], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More