EnhancerDB
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  3. rs542397140[chr1:17223481]
Enhancers that have rs542397140[chr1:17223481]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs542397140[chr1:17223481]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17223469 17223484 MEF2A JASPAR yes 27062746
chr1 17223469 17223488 REST JASPAR yes 27062747
chr1 17223470 17223485 MEF2C JASPAR yes 27062748
Genes associated with rs542397140[chr1:17223481], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More