EnhancerDB
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  3. rs542398242[chr12:93490850]
Enhancers that have rs542398242[chr12:93490850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 93471972 93499275 enh14895
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs542398242[chr12:93490850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 93490842 93490857 RFX5 JASPAR yes 122818194
chr12 93490850 93490853 MYB TRANSFAC yes 122818195
chr12 93490850 93490866 SOX4 JASPAR yes 122818196
Genes associated with rs542398242[chr12:93490850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More