EnhancerDB
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  3. rs542398557[chr1:109719325]
Enhancers that have rs542398557[chr1:109719325]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 109717025 109726595 enh49933
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Stomach Thyroid Pancreas Epithelial (MCF-7)
Transcript factors that have rs542398557[chr1:109719325]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 109719310 109719328 MAFF JASPAR yes 31414516
chr1 109719311 109719326 MAFK JASPAR yes 31414517
chr1 109719315 109719326 NRL JASPAR yes 31414520
chr1 109719318 109719332 FOXF2 JASPAR yes 31414521
chr1 109719318 109719333 FOXP1 JASPAR yes 31414522
chr1 109719319 109719333 GATA2 JASPAR yes 31414523
chr1 109719320 109719332 FOXC2 JASPAR yes 31414524
chr1 109719321 109719329 GATA3 JASPAR yes 31414525
chr1 109719321 109719332 FOXP2 JASPAR yes 31414526
chr1 109719323 109719331 FOXG1 JASPAR yes 31414527
chr1 109719323 109719331 FOXO3 JASPAR yes 31414528
Genes associated with rs542398557[chr1:109719325], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More