EnhancerDB
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  3. rs542440446[chr3:129115217]
Enhancers that have rs542440446[chr3:129115217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 129095885 129119955 enh7528
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Colon (HCT116) Thyroid Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs542440446[chr3:129115217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 129115203 129115218 HNF4A JASPAR yes 5658242
chr3 129115204 129115218 NR2F1 JASPAR yes 5658243
chr3 129115204 129115218 RXRB JASPAR yes 5658244
chr3 129115204 129115218 RXRG JASPAR yes 5658245
chr3 129115204 129115219 HNF4G JASPAR yes 5658246
chr3 129115204 129115219 NR2C2 JASPAR yes 5658247
chr3 129115211 129115228 RARA JASPAR yes 5658248
chr3 129115211 129115228 RXRA JASPAR yes 5658249
Genes associated with rs542440446[chr3:129115217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More