EnhancerDB
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  3. rs542440779[chr5:172887870]
Enhancers that have rs542440779[chr5:172887870]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172875285 172888095 enh22823
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Heart
Transcript factors that have rs542440779[chr5:172887870]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172887858 172887876 RARA JASPAR yes 67873586
Genes associated with rs542440779[chr5:172887870], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More