EnhancerDB
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  3. rs542451959[chr1:90274515]
Enhancers that have rs542451959[chr1:90274515]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90272025 90280755 enh79134
Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Uterus Epithelial (MCF-7)
Transcript factors that have rs542451959[chr1:90274515]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90274037 90274557 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107813757
chr1 90274037 90274637 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107813758
chr1 90274261 90274825 ZNF274 GTRD no Bone Marrow (K562) 107813763
chr1 90274297 90274776 ZNF274 GTRD no Liver (HepG2) 107813764
chr1 90274322 90274752 ZNF274 GTRD no Bone Marrow (K562) 107813765
chr1 90274339 90274666 TCF7L2 GTRD no Colon (HCT116) 107813766
chr1 90274505 90274515 EMX1 JASPAR yes 30621580
chr1 90274505 90274515 EVX2 JASPAR yes 30621581
chr1 90274508 90274516 HOXA5 JASPAR yes 30621583
chr1 90274508 90274524 GLIS1 JASPAR yes 30621584
chr1 90274514 90274524 MZF1 JASPAR yes 30621585
Genes associated with rs542451959[chr1:90274515], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More