EnhancerDB
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  3. rs542455898[chr1:177178175]
Enhancers that have rs542455898[chr1:177178175]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 177175512 177182615 enh27268
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Adrenal Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Heart
Transcript factors that have rs542455898[chr1:177178175]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 177178139 177178403 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107847253
chr1 177178150 177178391 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107847254
chr1 177178169 177178182 ELF3 JASPAR yes 33346675
chr1 177178174 177178192 ESR1 JASPAR yes 33346676
Genes associated with rs542455898[chr1:177178175], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More