EnhancerDB
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Enhancers that have rs542466473[chr19:10341916]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10331225 10355975 enh5000
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs542466473[chr19:10341916]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10341704 10342204 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848454
chr19 10341725 10342045 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848455
chr19 10341789 10342129 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848456
chr19 10341833 10342001 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21848457
chr19 10341843 10341954 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21848458
chr19 10341889 10342325 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848459
Genes associated with rs542466473[chr19:10341916], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More