EnhancerDB
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  3. rs542474676[chr1:5657848]
Enhancers that have rs542474676[chr1:5657848]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 5655365 5660415 enh11436
Stomach Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs542474676[chr1:5657848]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 5657839 5657853 PLAG1 JASPAR yes 26361988
chr1 5657840 5657850 SP1 JASPAR yes 26361990
chr1 5657843 5657853 SP1 JASPAR yes 26361991
chr1 5657844 5657859 TFAP2C JASPAR yes 26361992
chr1 5657845 5657850 SP1 TRANSFAC yes 26361993
chr1 5657845 5657851 SP1 TRANSFAC yes 26361994
chr1 5657845 5657852 SP1 TRANSFAC yes 26361995
chr1 5657846 5657858 INSM1 JASPAR yes 26361996
chr1 5657846 5657858 TFAP2A JASPAR yes 26361997
chr1 5657846 5657858 TFAP2B JASPAR yes 26361998
chr1 5657846 5657858 TFAP2C JASPAR yes 26361999
chr1 5657848 5657857 TFAP2A JASPAR yes 26362000
Genes associated with rs542474676[chr1:5657848], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More