EnhancerDB
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  3. rs542498765[chr2:233491267]
Enhancers that have rs542498765[chr2:233491267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 233482285 233496075 enh19330
Prostate (PC-3) Prostate (RWPE1) Placenta Lung (PC-9) Uterus Epithelial (MCF-7)
Transcript factors that have rs542498765[chr2:233491267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 233491256 233491267 PHOX2A JASPAR yes 81784772
chr2 233491256 233491267 PROP1 JASPAR yes 81784773
chr2 233491256 233491272 POU4F2 JASPAR yes 81784774
chr2 233491256 233491272 POU4F3 JASPAR yes 81784775
chr2 233491257 233491267 PAX3 JASPAR yes 81784776
chr2 233491257 233491267 PAX7 JASPAR yes 81784777
chr2 233491258 233491272 POU4F1 JASPAR yes 81784778
chr2 233491258 233491273 HNF1A JASPAR yes 81784779
chr2 233491259 233491269 GSX1 JASPAR yes 81784780
chr2 233491259 233491269 GSX2 JASPAR yes 81784781
chr2 233491259 233491269 LHX2 JASPAR yes 81784782
chr2 233491259 233491269 LHX6 JASPAR yes 81784783
chr2 233491259 233491269 MNX1 JASPAR yes 81784784
chr2 233491259 233491269 NOTO JASPAR yes 81784785
chr2 233491259 233491269 POU6F1 JASPAR yes 81784786
chr2 233491259 233491269 RAX JASPAR yes 81784787
chr2 233491259 233491274 HNF1A JASPAR yes 81784788
chr2 233491260 233491268 ISX JASPAR yes 81784789
chr2 233491260 233491268 LMX1A JASPAR yes 81784790
chr2 233491260 233491268 LMX1B JASPAR yes 81784791
chr2 233491260 233491268 NKX6-1 JASPAR yes 81784792
chr2 233491260 233491268 NKX6-2 JASPAR yes 81784793
chr2 233491260 233491268 PRRX1 JASPAR yes 81784794
chr2 233491260 233491268 RAX2 JASPAR yes 81784795
chr2 233491260 233491268 SHOX JASPAR yes 81784796
chr2 233491260 233491268 UNCX JASPAR yes 81784797
chr2 233491260 233491268 VAX1 JASPAR yes 81784798
chr2 233491260 233491271 PHOX2A JASPAR yes 81784799
chr2 233491260 233491271 PROP1 JASPAR yes 81784800
chr2 233491260 233491274 POU4F1 JASPAR yes 81784801
chr2 233491260 233491276 POU4F2 JASPAR yes 81784802
chr2 233491260 233491276 POU4F3 JASPAR yes 81784803
chr2 233491261 233491271 PAX3 JASPAR yes 81784804
chr2 233491261 233491271 PAX7 JASPAR yes 81784805
chr2 233491261 233491272 PHOX2A JASPAR yes 81784806
chr2 233491261 233491272 PROP1 JASPAR yes 81784807
chr2 233491263 233491273 GSX1 JASPAR yes 81784808
chr2 233491263 233491273 GSX2 JASPAR yes 81784809
chr2 233491263 233491273 LHX2 JASPAR yes 81784810
chr2 233491263 233491273 LHX6 JASPAR yes 81784811
chr2 233491263 233491273 MNX1 JASPAR yes 81784812
chr2 233491263 233491273 NOTO JASPAR yes 81784813
chr2 233491263 233491273 POU6F1 JASPAR yes 81784814
chr2 233491263 233491273 RAX JASPAR yes 81784815
chr2 233491264 233491272 ISX JASPAR yes 81784816
chr2 233491264 233491272 LMX1A JASPAR yes 81784817
chr2 233491264 233491272 LMX1B JASPAR yes 81784818
chr2 233491264 233491272 NKX6-1 JASPAR yes 81784819
chr2 233491264 233491272 NKX6-2 JASPAR yes 81784820
chr2 233491264 233491272 PRRX1 JASPAR yes 81784821
chr2 233491264 233491272 RAX2 JASPAR yes 81784822
chr2 233491264 233491272 SHOX JASPAR yes 81784823
chr2 233491264 233491272 UNCX JASPAR yes 81784824
chr2 233491264 233491272 VAX1 JASPAR yes 81784825
chr2 233491264 233491277 DUXA JASPAR yes 81784826
chr2 233491264 233491278 POU4F1 JASPAR yes 81784827
chr2 233491265 233491275 PAX3 JASPAR yes 81784828
chr2 233491265 233491275 PAX7 JASPAR yes 81784829
chr2 233491265 233491276 DUX4 JASPAR yes 81784830
chr2 233491265 233491276 PHOX2A JASPAR yes 81784831
chr2 233491265 233491276 PROP1 JASPAR yes 81784832
chr2 233491267 233491281 POU4F1 JASPAR yes 81784833
Genes associated with rs542498765[chr2:233491267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More