EnhancerDB
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  3. rs542527550[chr4:148983739]
Enhancers that have rs542527550[chr4:148983739]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 148970716 148983995 enh8265
Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs542527550[chr4:148983739]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 148983733 148983739 TBP TRANSFAC yes 93545747
chr4 148983734 148983755 IRF1 JASPAR yes 93545748
chr4 148983737 148983751 SPIC JASPAR yes 93545749
Genes associated with rs542527550[chr4:148983739], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More