EnhancerDB
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  3. rs542530839[chr1:17224523]
Enhancers that have rs542530839[chr1:17224523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs542530839[chr1:17224523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17224519 17224529 HOXA13 JASPAR yes 27062952
chr1 17224519 17224529 HOXB13 JASPAR yes 27062953
chr1 17224519 17224529 HOXD13 JASPAR yes 27062954
Genes associated with rs542530839[chr1:17224523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More