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- rs542599553[chr19:5049204]
Enhancers that have rs542599553[chr19:5049204]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
5042775 |
5071015 |
enh4976 |
|
|
Transcript factors that have rs542599553[chr19:5049204]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
5046716
|
5050066
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374262
|
|
|
chr19
|
5046716
|
5050066
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374263
|
|
|
chr19
|
5046782
|
5050636
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374265
|
|
|
chr19
|
5046782
|
5050636
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374266
|
|
|
chr19
|
5047139
|
5049417
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374268
|
|
|
chr19
|
5047139
|
5049696
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374269
|
|
|
chr19
|
5047367
|
5049260
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108374272
|
|
|
chr19
|
5047557
|
5049272
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108374276
|
|
|
chr19
|
5047585
|
5049557
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108374277
|
|
|
chr19
|
5047619
|
5049246
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108374279
|
|
|
chr19
|
5047685
|
5049724
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108374283
|
|
|
chr19
|
5047752
|
5049755
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108374289
|
|
|
chr19
|
5047806
|
5049801
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108374292
|
|
|
chr19
|
5047843
|
5049891
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108374301
|
|
|
chr19
|
5047846
|
5049305
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108374305
|
|
|
chr19
|
5047848
|
5049627
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108374306
|
|
|
chr19
|
5047860
|
5049992
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108374310
|
|
|
chr19
|
5047865
|
5050094
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374313
|
|
|
chr19
|
5047895
|
5049265
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374320
|
|
|
chr19
|
5047901
|
5049651
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108374322
|
|
|
chr19
|
5047926
|
5049632
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108374330
|
|
|
chr19
|
5048020
|
5049701
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108374354
|
|
|
chr19
|
5048069
|
5049410
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374369
|
|
Genes associated with rs542599553[chr19:5049204], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |