EnhancerDB
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  3. rs542663827[chr3:11189874]
Enhancers that have rs542663827[chr3:11189874]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 11179711 11191235 enh35183
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Thymus
Transcript factors that have rs542663827[chr3:11189874]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 11189861 11189882 IRF1 JASPAR yes 398977
chr3 11189862 11189877 FOXP1 JASPAR yes 398978
chr3 11189862 11189882 RREB1 JASPAR yes 398979
chr3 11189862 11189883 IRF1 JASPAR yes 398980
chr3 11189863 11189878 FOXP1 JASPAR yes 398981
chr3 11189863 11189884 IRF1 JASPAR yes 398982
chr3 11189864 11189879 FOXP1 JASPAR yes 398983
chr3 11189864 11189885 IRF1 JASPAR yes 398984
chr3 11189865 11189880 FOXP1 JASPAR yes 398985
chr3 11189865 11189886 IRF1 JASPAR yes 398986
chr3 11189866 11189881 FOXP1 JASPAR yes 398987
chr3 11189866 11189887 IRF1 JASPAR yes 398988
chr3 11189867 11189882 FOXP1 JASPAR yes 398989
chr3 11189867 11189888 IRF1 JASPAR yes 398990
chr3 11189868 11189883 FOXP1 JASPAR yes 398991
chr3 11189868 11189889 IRF1 JASPAR yes 398992
chr3 11189869 11189884 FOXP1 JASPAR yes 398993
chr3 11189869 11189890 IRF1 JASPAR yes 398994
chr3 11189870 11189885 FOXP1 JASPAR yes 398995
chr3 11189872 11189887 FOXP1 JASPAR yes 398996
chr3 11189873 11189894 IRF1 JASPAR yes 398997
chr3 11189874 11189889 FOXP1 JASPAR yes 398998
chr3 11189874 11189895 IRF1 JASPAR yes 398999
Genes associated with rs542663827[chr3:11189874], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More