EnhancerDB
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  3. rs542690844[chr1:51447272]
Enhancers that have rs542690844[chr1:51447272]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 51439185 51454555 enh353
Cervix (HeLa-S3) Prostate (RWPE1) Bone (Osteoblast) Muscle (A673) Blood (Karpas-422) Uterus
Transcript factors that have rs542690844[chr1:51447272]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 51447263 51447273 EMX1 JASPAR yes 28822627
chr1 51447263 51447273 GSX2 JASPAR yes 28822628
chr1 51447263 51447273 HOXB2 JASPAR yes 28822629
chr1 51447263 51447273 MEOX2 JASPAR yes 28822630
chr1 51447263 51447273 MNX1 JASPAR yes 28822631
chr1 51447264 51447272 LMX1A JASPAR yes 28822632
chr1 51447264 51447272 LMX1B JASPAR yes 28822633
chr1 51447264 51447272 NKX6-1 JASPAR yes 28822634
chr1 51447264 51447272 NKX6-2 JASPAR yes 28822635
chr1 51447264 51447272 PDX1 JASPAR yes 28822636
chr1 51447264 51447272 VAX1 JASPAR yes 28822637
chr1 51447264 51447272 VAX2 JASPAR yes 28822638
chr1 51447264 51447272 VSX1 JASPAR yes 28822639
Genes associated with rs542690844[chr1:51447272], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More