EnhancerDB
  1. Home
  2. SNP
  3. rs542715716[chr12:48285275]
Enhancers that have rs542715716[chr12:48285275]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 48274565 48298301 enh43733
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Liver Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Muscle (Myotube) Thymus Epithelial (MCF-7)
chr12 48285250 48285393 vista13305
VISTA
Transcript factors that have rs542715716[chr12:48285275]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 48285167 48285443 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108029148
chr12 48285173 48285453 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108029149
chr12 48285180 48285420 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108029150
chr12 48285249 48285415 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21543965
chr12 48285249 48285415 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108029151
chr12 48285266 48285286 RREB1 JASPAR yes 82399183
chr12 48285266 48285286 RREB1 JASPAR yes 120725365
Genes associated with rs542715716[chr12:48285275], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More