EnhancerDB
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  3. rs542787455[chr1:168362444]
Enhancers that have rs542787455[chr1:168362444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168352841 168381875 enh12353
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Lung (A549) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs542787455[chr1:168362444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168362185 168362505 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21347693
chr1 168362230 168362454 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21347694
chr1 168362434 168362452 ESR2 JASPAR yes 32921043
chr1 168362440 168362444 YY1 TRANSFAC yes 32921046
chr1 168362440 168362453 NR2F1 JASPAR yes 32921047
chr1 168362442 168362453 ESRRA JASPAR yes 32921048
chr1 168362442 168362453 ESRRB JASPAR yes 32921049
chr1 168362443 168362451 NR4A2 JASPAR yes 32921050
chr1 168362443 168362457 TLX1 JASPAR yes 32921051
Genes associated with rs542787455[chr1:168362444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More