EnhancerDB
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  3. rs542814827[chr1:43473226]
Enhancers that have rs542814827[chr1:43473226]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43453005 43490361 enh11805
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 43473183 43473398 vista1395
VISTA
Transcript factors that have rs542814827[chr1:43473226]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43471812 43473352 ZBTB33 GTRD no Brain (SK-N-SH) 107803014
chr1 43473217 43473227 SP1 JASPAR yes 28477301
chr1 43473217 43473227 SP1 JASPAR yes 118282353
chr1 43473225 43473231 SP1 TRANSFAC yes 28477302
chr1 43473225 43473231 SP1 TRANSFAC yes 118282354
Genes associated with rs542814827[chr1:43473226], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More