EnhancerDB
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  3. rs542871727[chr5:145154085]
Enhancers that have rs542871727[chr5:145154085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 145152085 145158735 enh38484
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs542871727[chr5:145154085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 145154073 145154088 HNF1A JASPAR yes 66623649
chr5 145154074 145154087 HNF1B JASPAR yes 66623650
chr5 145154080 145154095 MEF2A JASPAR yes 66623651
chr5 145154083 145154095 SRF JASPAR yes 66623652
Genes associated with rs542871727[chr5:145154085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More