EnhancerDB
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  3. rs542947079[chr1:185772351]
Enhancers that have rs542947079[chr1:185772351]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185770925 185784775 enh67188
Prostate (PC-3) Brain (SK-N-MC) Muscle (A673) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs542947079[chr1:185772351]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185772332 185772353 IRF1 JASPAR yes 33844565
chr1 185772333 185772354 IRF1 JASPAR yes 33844566
chr1 185772336 185772351 FOXP1 JASPAR yes 33844568
chr1 185772336 185772357 IRF1 JASPAR yes 33844569
chr1 185772337 185772352 FOXP1 JASPAR yes 33844570
chr1 185772337 185772358 IRF1 JASPAR yes 33844571
chr1 185772338 185772353 FOXP1 JASPAR yes 33844572
chr1 185772338 185772359 IRF1 JASPAR yes 33844573
chr1 185772339 185772354 FOXP1 JASPAR yes 33844574
chr1 185772339 185772360 IRF1 JASPAR yes 33844575
chr1 185772340 185772355 FOXP1 JASPAR yes 33844576
chr1 185772340 185772361 IRF1 JASPAR yes 33844577
chr1 185772341 185772356 FOXP1 JASPAR yes 33844578
chr1 185772343 185772358 FOXP1 JASPAR yes 33844579
chr1 185772344 185772359 STAT2 JASPAR yes 33844580
chr1 185772345 185772360 FOXP1 JASPAR yes 33844581
chr1 185772345 185772366 IRF1 JASPAR yes 33844582
chr1 185772347 185772359 FOXC2 JASPAR yes 33844583
chr1 185772348 185772359 FOXP2 JASPAR yes 33844584
chr1 185772350 185772362 IRF1 JASPAR yes 33844585
chr1 185772350 185772365 FOXP1 JASPAR yes 33844586
Genes associated with rs542947079[chr1:185772351], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More