EnhancerDB
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  3. rs542969858[chr16:88456824]
Enhancers that have rs542969858[chr16:88456824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88439193 88457015 enh57695
Prostate (PC-3) Epithelial (MCF-7) Esophagus Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Heart
Transcript factors that have rs542969858[chr16:88456824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88448689 88458501 TCF7L2 GTRD no Colon (HCT116) 21736268
chr16 88448689 88458501 TCF7L2 GTRD no Colon (HCT116) 108222134
chr16 88450953 88457662 TCF7L2 GTRD no Colon (HCT116) 21736294
chr16 88451157 88460694 TCF7L2 GTRD no Colon (HCT116) 21736297
chr16 88451270 88457611 TCF7L2 GTRD no Colon (HCT116) 21736300
chr16 88451349 88457003 ZNF143 GTRD no Epithelial (MCF-7) 21736301
chr16 88451413 88457077 TCF7L2 GTRD no Colon (HCT116) 21736302
chr16 88451651 88457633 ZNF143 GTRD no Epithelial (MCF-7) 21736306
chr16 88451938 88457708 ZNF143 GTRD no Epithelial (MCF-7) 21736311
chr16 88452281 88456882 ZNF143 GTRD no Epithelial (MCF-7) 21736322
chr16 88453551 88458447 ZNF143 GTRD no Epithelial (MCF-7) 21736343
chr16 88453568 88457942 ZNF143 GTRD no Epithelial (MCF-7) 21736347
chr16 88453570 88458024 ZNF143 GTRD no Epithelial (MCF-7) 21736348
chr16 88453738 88456881 ZNF143 GTRD no Epithelial (MCF-7) 21736365
chr16 88454764 88456916 TCF7L2 GTRD no Colon (HCT116) 21736407
chr16 88454903 88457521 TCF7L2 GTRD no Colon (HCT116) 21736419
chr16 88456429 88457286 TCF7L2 GTRD no Colon (HCT116) 21736444
chr16 88456518 88457561 TCF7L2 GTRD no Colon (HCT116) 21736445
chr16 88456582 88457409 TCF7L2 GTRD no Colon (HCT116) 21736446
chr16 88456810 88457327 TCF7L2 GTRD no Colon (HCT116) 21736447
chr16 88456815 88456827 HLF JASPAR yes 12283895
chr16 88456822 88456825 MYB TRANSFAC yes 12283896
chr16 88456824 88456839 ZIC4 JASPAR yes 12283897
Genes associated with rs542969858[chr16:88456824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More