EnhancerDB
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  3. rs543005533[chr12:123210261]
Enhancers that have rs543005533[chr12:123210261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123207180 123213095 enh2663
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs543005533[chr12:123210261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123210249 123210269 RREB1 JASPAR yes 124293068
chr12 123210257 123210277 RREB1 JASPAR yes 124293069
chr12 123210259 123210274 FOXP1 JASPAR yes 124293070
chr12 123210260 123210275 FOXP1 JASPAR yes 124293071
chr12 123210261 123210276 FOXP1 JASPAR yes 124293072
chr12 123210261 123210282 IRF1 JASPAR yes 124293073
Genes associated with rs543005533[chr12:123210261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More