EnhancerDB
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  3. rs543012501[chr1:172939238]
Enhancers that have rs543012501[chr1:172939238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs543012501[chr1:172939238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172938123 172939437 TEF1 GTRD no Bone (Osteoblast) 21350791
chr1 172938123 172939437 TEF1 GTRD no Bone (Osteoblast) 107846511
chr1 172939229 172939241 MEF2A JASPAR yes 33173252
chr1 172939229 172939241 MEF2B JASPAR yes 33173253
chr1 172939229 172939241 MEF2D JASPAR yes 33173254
chr1 172939231 172939239 FOXL1 JASPAR yes 33173255
Genes associated with rs543012501[chr1:172939238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More