EnhancerDB
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  3. rs543120466[chr17:78582630]
Enhancers that have rs543120466[chr17:78582630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78568992 78597075 enh4631
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Blood (OCI-LY7) Lung (A549) Blood (GM12878) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs543120466[chr17:78582630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78582620 78582630 NHLH1 JASPAR yes 56257944
chr17 78582621 78582640 REST JASPAR yes 56257945
chr17 78582624 78582634 GCM2 JASPAR yes 56257946
chr17 78582628 78582643 SCRT1 JASPAR yes 56257947
Genes associated with rs543120466[chr17:78582630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More