EnhancerDB
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  3. rs543273909[chr12:53746428]
Enhancers that have rs543273909[chr12:53746428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53740625 53751988 enh14741
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Esophagus Stomach Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs543273909[chr12:53746428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53745793 53748074 ZNF143 GTRD no Epithelial (MCF-7) 21549050
chr12 53746032 53747477 ZNF274 GTRD no Cervix (HeLa-S3) 21549051
chr12 53746055 53747485 ZNF274 GTRD no Bone Marrow (K562) 21549052
chr12 53746082 53747292 ZNF274 GTRD no Bone Marrow (K562) 21549053
chr12 53746131 53747052 ZNF143 GTRD no Epithelial (MCF-7) 21549054
chr12 53746155 53747652 ZNF143 GTRD no Epithelial (MCF-7) 21549055
chr12 53746160 53747402 ZNF143 GTRD no Epithelial (MCF-7) 21549056
chr12 53746200 53747613 ZNF143 GTRD no Epithelial (MCF-7) 21549057
chr12 53746227 53746691 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549058
chr12 53746236 53746766 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549059
chr12 53746238 53747449 ZNF274 GTRD no Bone Marrow (K562) 21549060
chr12 53746243 53746759 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549061
chr12 53746274 53747623 ZNF143 GTRD no Epithelial (MCF-7) 21549062
chr12 53746289 53747032 ZNF143 GTRD no Epithelial (MCF-7) 21549063
chr12 53746301 53747257 ZNF143 GTRD no Epithelial (MCF-7) 21549064
chr12 53746305 53747281 ZNF274 GTRD no Bone Marrow (K562) 21549065
chr12 53746313 53747000 ZNF143 GTRD no Epithelial (MCF-7) 21549066
chr12 53746328 53746973 TCF7L2 GTRD no Colon (HCT116) 21549067
chr12 53746331 53747360 ZNF274 GTRD no Bone Marrow (K562) 21549068
chr12 53746342 53746798 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549069
chr12 53746342 53747392 ZNF274 GTRD no Bone Marrow (K562) 21549070
chr12 53746365 53747048 ZNF274 GTRD no Bone Marrow (K562) 21549071
chr12 53746366 53747259 ZNF143 GTRD no Epithelial (MCF-7) 21549072
chr12 53746366 53747538 ZNF143 GTRD no Epithelial (MCF-7) 21549073
chr12 53746367 53747305 ZNF274 GTRD no Bone Marrow (K562) 21549074
chr12 53746371 53747255 ZNF274 GTRD no Bone Marrow (K562) 21549075
chr12 53746376 53746760 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549076
chr12 53746377 53746853 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549077
chr12 53746378 53746834 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549078
chr12 53746379 53747639 ZNF143 GTRD no Epithelial (MCF-7) 21549079
chr12 53746382 53747091 TCF7L2 GTRD no Colon (HCT116) 21549080
chr12 53746388 53747267 ZNF143 GTRD no Epithelial (MCF-7) 21549081
chr12 53746389 53746993 ZNF143 GTRD no Epithelial (MCF-7) 21549082
chr12 53746393 53746969 ZNF143 GTRD no Epithelial (MCF-7) 21549083
chr12 53746394 53747409 ZNF274 GTRD no Bone Marrow (K562) 21549084
chr12 53746395 53746765 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549085
chr12 53746403 53746763 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549086
chr12 53746403 53746799 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549087
chr12 53746404 53746734 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549088
chr12 53746406 53746726 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549089
chr12 53746410 53747092 ZNF274 GTRD no Bone Marrow (K562) 21549090
chr12 53746422 53747183 ZNF274 GTRD no Cervix (HeLa-S3) 21549091
chr12 53746423 53746437 SPIC JASPAR yes 120980999
chr12 53746426 53746706 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549092
chr12 53746428 53746718 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549093
Genes associated with rs543273909[chr12:53746428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More