EnhancerDB
  1. Home
  2. SNP
  3. rs543552080[chr1:117015555]
Enhancers that have rs543552080[chr1:117015555]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543552080[chr1:117015555]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117015421 117016377 ZNF143 GTRD no Epithelial (MCF-7) 21332809
chr1 117015437 117016480 ZNF143 GTRD no Epithelial (MCF-7) 21332810
chr1 117015531 117016164 ZNF143 GTRD no Epithelial (MCF-7) 21332811
chr1 117015537 117016205 ZNF143 GTRD no Epithelial (MCF-7) 21332812
chr1 117015555 117015565 MZF1 JASPAR yes 31810491
Genes associated with rs543552080[chr1:117015555], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More